Crystallography & Symmetry
patterns derived from their groups
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Settings — the series

4 essays on one idea, from the one that introduces it to the one that assumes the rest.
  1. P2₁/c under every cell choice. One group, described in each of the 6 bases that keep its cell the shape its system requires, with the symbol derived from the operations each time. The distinct symbols are P2₁/c, P2₁/a, P2₁/n — 3 names for one group. Nothing about the crystal has changed: the basis changes all have determinant ±1, so the lattice is untouched, and the census of rotations, screws, mirrors and glides is identical in every row, since conjugation cannot turn one kind into another. What changes is which lattice vector a glide's translation is half of, and the glide letter names exactly that.

    One group, three symbols

    P2₁/c, P2₁/a and P2₁/n are the same space group written on three choices of axes, and the literature contains all three as though they were different. Deriving a symbol from a group's own operations shows why — and found an entry on this site that had been carried under another setting's name for two phases.

    part 1 · space-groups
  2. Fddd has two published origins. The two conventions, computed from the operations. The International Tables place the origin at the point of highest site symmetry, and also at a centre of inversion, and for this group those are different points — so the group is printed twice, with every coordinate in the second table shifted by (-0.125, 0.125, -0.125) from the first. A structure published on one and read on the other has every atom in the wrong place by that vector, the refinement fails in a way that looks like bad data, and nothing in the symbol says which was used.

    Two origins for one group

    The International Tables place the origin at the point of highest site symmetry, and also at a centre of inversion. For twenty-four of the two hundred and thirty those are different points, so the group is printed twice with every coordinate shifted — and nothing in the symbol says which table a structure was written against.

    part 2 · space-groups
  3. Pnma has 6 names. The group Pnma with its three axes relabelled in each of the six possible ways. Every row is the same group, and each row is checked as it is drawn: the change of basis has determinant one, conjugating back gives the original operations exactly, and the census of screws, glides, mirrors and rotations is unchanged — and 6 different symbols come out. Each symbol is derived from the conjugated operations, not looked up, by the same routine that has to reproduce the symbol every group was entered under.

    Six ways to name one group

    Pnma is also Pmnb, Pbnm, Pcmn, Pmcn and Pnam. Nothing about the crystal changes between those six; what changes is which axis was called a. In an orthorhombic group the axes are inequivalent and unlabelled, and naming them is a choice made six ways.

    part 3 · space-groups
  4. One change of setting, four rules. The four things a structure report contains and the rule each obeys under a change of setting with basis change P and origin shift p. The cell and the indices are multiplied by P; a coordinate is multiplied by its inverse, after the origin has been subtracted; and an operation is conjugated and then shifted by (W − I)p, a term the other three have no equivalent of. Applied to Pnma with the change below, the operations still close into 8, the orbit maps point for point, and every |F| is unchanged.

    One matrix, four rules

    Changing the setting of a structure is one matrix and one origin shift — and the cell, the coordinates, the indices and the operations each obey a different rule under it. Three of the four ways of getting it wrong still leave a closed group of the right order, so closure catches none of them.

    part 4 · space-groups

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