Into space

Turning and climbing at once

A rotation has a fixed point and a screw has none. That sounds like a small difference and it is the reason a space group is not a point group with extra letters, the reason two hundred and thirty is not seventy-three, and the reason a helix can be a crystal.

Assumes The step a flat surface has no room for and The four motions of the plane.

Put a point somewhere in a crystal. Turn it a quarter turn about a vertical line, and at the same time lift it a quarter of the way up the cell. Do it again, and again, and again. After four moves the point has turned all the way round and climbed exactly one cell — so it is sitting directly above where it started, which in a periodic crystal is the same as being where it started.

That is a 4₁ screw axis, and the whole of this field is downstream of it.

The 4₁ screw axis. 1 of the eleven screw axes a lattice permits, each drawn as the helix it is: 4₁. A turn of 2π/n followed by an advance of m/n of the repeat, so that n turns land exactly m cells along. 0 of those drawn are its own mirror image; the rest come in left- and right-handed pairs.
Fig. 1 The operation, followed through its four applications. The line is the axis; the curve is the path a point takes; the dots are the four images. The fourth is a whole cell above the first, so it is a lattice translate of it, and the operation is a symmetry of something periodic. No dot is where any other dot is, and none of them is on the axis.

The thing a rotation has that this does not

A rotation about an axis leaves the axis alone. Every point on it stays exactly where it is, which is what it means for a line to be the axis.

A screw leaves nothing alone. Take a point on the line and apply the operation: it turns by nothing, since it is on the axis, and then it climbs. It has moved. Apply the operation to any point in the crystal, in fact, and it moves — there is no fixed point anywhere, and this is the property that puts the operation outside every point group.

A point group is a group of operations that all fix a common point. That is the definition, and a screw fails it immediately. So the point group of a crystal containing a screw axis does not contain that screw; what it contains is the rotation part of it, obtained by throwing the climb away. And throwing the climb away is exactly what the quotient by the translations does.

Why the climb has to be a simple fraction

The rise cannot be anything. It is forced to a rational fraction of the cell with a small denominator, and the argument is two lines.

Take an axis of order n: the rotation part turns by 2π/n, and applying it n times gives a full turn, which is the identity. So applying the screw n times gives a pure translation along the axis — the linear parts have cancelled and only the climbs are left, n of them.

That translation has to be a lattice vector, because it is a symmetry of the crystal and every symmetry with no rotation in it is a lattice translation. So n times the rise is a whole number of cells. Call that number m, and the rise is m/n.

3 screw axes. 3 of the eleven screw axes a lattice permits, each drawn as the helix it is: 6₁, 6₂, 6₃. A turn of 2π/n followed by an advance of m/n of the repeat, so that n turns land exactly m cells along. 1 of those drawn is its own mirror image; the rest come in left- and right-handed pairs.
Fig. 2 Three sixfold screws, each followed for six turns, each landing on a whole number of cells. The first climbs one cell in six turns, the second two, the third three. The rise is not a free parameter with a nice value chosen for it — it is m/n, and m is whatever whole number of cells the six turns amount to.

Two constraints, and everything else follows. The order is constrained by the crystallographic restriction to 1, 2, 3, 4 or 6, because the rotation part is an integer matrix and its trace has to be an integer. The rise is constrained by the argument above to a whole number of n-ths. Between them they leave a small, countable set of screws, and counting it is the next rung.

The order of a screw is not the order of its rotation

There is a subtlety in the last figure worth pulling out, because it is where the word “order” becomes ambiguous and the ambiguity matters.

A 6₃ screw turns by a sixth and climbs by a half. Apply it twice: the point has turned by a third and climbed a whole cell, which is a lattice translation — so the square of a 6₃ is a pure threefold rotation, modulo the lattice. Apply it three times: turned by a half, climbed one and a half cells, which is a 2₁ screw.

So a single 6₃ axis carries a sixfold screw, a threefold rotation and a two-fold screw, all on the same line. Its order as an operation of the quotient group is six; the order of the rotation left after two applications is three; and neither number is wrong.

Every operation on one P6₃ axis. The screw of P6₃ applied to itself, 6 times over, with what each power turns out to be. The turn accumulates a 6th at a time and the climb accumulates 3/6 at a time, reduced into the cell because a climb of a whole cell is a lattice translation and therefore no climb at all. That reduction is why a single axis carries operations of several kinds: 2 of the 5 powers land on a whole number of cells and are pure rotations, sitting on the same line as the screw that produced them. The count of those is gcd(3, 6) − 1, worked out from the group rather than read off the rows, and the rows have to agree with it.
Fig. 3 The whole of one axis, written out. The turn accumulates a sixth at a time and the climb accumulates a half at a time, and the climb is reduced into the cell each time because a climb of a whole cell is a lattice translation and so is no climb at all. That reduction is where the other two operations come from: the second and fourth powers land on a whole number of cells and are pure threefold rotations, and the third has climbed a half and is a 2₁.

The same happens whenever the rise and the order share a factor. A 4₂ squares to a pure translation by one cell, so its square is the identity of the quotient and it behaves, in that one respect, like a two-fold. A 6₂ cubes to a translation by two cells. The screws whose m and n are coprime — 2₁, 3₁, 3₂, 4₁, 4₃, 6₁, 6₅ — are the ones where nothing shorter than n applications gets back to the axis.

This is why the enumeration reports the reduced order alongside the symbol. It is a property of the pair (m, n) rather than of either alone, and it is the arithmetic reason 6₃ is not a relabelled 3₁ even though both climb a third of a cell in two turns.

Why an origin cannot help

The property that makes a screw a screw is not “the axis is in an awkward place”. It is worth insisting on this, because the intuition that a screw is a rotation seen from the wrong angle is very natural and completely wrong.

Move the origin anywhere. The axis moves with it — that is what moving an origin does. But the rise does not change, because the rise is what happens to the separation between a point and its image, and a translation of the whole coordinate system does not change separations.

What moving the origin of P4₁ does, and does not. One screw of P4₁, described from six different origins. Each row recomputes the operation's translation as t + s − Ms, which is what changing the origin does to it, and then splits that translation again from scratch. The location column takes 4 different values across the six, because that column is a statement about where the origin was put. The intrinsic column is the same in every row, in exact fractions and not to within any tolerance — and it is the same because it is a property of the operation rather than of the description. That is the whole reason a screw cannot be argued away as a rotation seen from an awkward place: the awkwardness is in the location column, and the screw is in the other one.
Fig. 4 The claim tested rather than tabulated. One operation of P4₁, described from six different origins, its translation recomputed at each as t + s − Ms and split again from scratch. The location column takes a different value nearly every time, because that column is a statement about where the origin was put. The intrinsic column is the same in all six, in exact fractions and not to within anything.

The arithmetic version of this is the split: an operation’s translation is the sum of an intrinsic part, which is one n-th of the sum of the operation applied to itself n times, and a location part, which is everything a change of origin can produce. The intrinsic part of a rotation is zero. The intrinsic part of a screw is its rise. Nothing moves a number from one column to the other.

The helices that are already famous

The word “screw axis” sounds like a technicality of crystallographic notation. It is not — it is the symmetry of every helix anybody has heard of.

DNA in its B form has ten base pairs per turn and a rise of 3.4 ångströms each, so the double helix is invariant under a rotation of 36° combined with a climb. That is a screw operation with n = 10, which no crystal can have, because ten-fold rotation is forbidden by the lattice. A single DNA molecule is not a crystal and does not have to obey the restriction; a crystal of DNA, which is how the structure was determined, has to arrange the molecules so that the crystal’s own symmetry is one of the permitted ones, and the molecule’s tenfold screw is not among them.

An α-helix in a protein has 3.6 residues per turn — a non-integer, and worse, an irrational-looking one. Again a symmetry of the molecule that cannot be a symmetry of a crystal containing it.

Quartz is where the crystal itself is the helix: chains of silicon–oxygen tetrahedra spiralling about threefold screw axes, in one of two mirror-image arrangements. Here the screw is crystallographic, n = 3, and the two directions of the spiral are the enantiomorphic pair P3₁21 and P3₂21.

The pattern across the three is worth noticing. The restriction constrains what a crystal can be, not what a molecule can be, and a molecule with a forbidden screw simply gets packed into a crystal that does not share it. That is the same distinction this site makes about quasicrystals and about the fivefold molecules whose symmetry no crystal reproduces.

Composition, and the screws nobody chose

A group with a screw in it can be built by putting one there. It can also acquire one without anybody asking, and in three dimensions that is the commoner case.

Two mirrors at right angles compose to a two-fold rotation about their line of intersection. Give one of them a slide along that line and the composition becomes a two-fold screw — the rotation is unchanged and the slide survives the composition, so the product has an intrinsic translation neither generator had along that direction.

The symmetry elements of Pmc2₁. Space group Pmc2₁, number 26, projected down c on a primitive orthorhombic cell. The symmetry elements drawn: 2 mirror planes, 2 glide planes, 4 2₁ screw axes.
Fig. 5 The result. A plain mirror perpendicular to a, a c glide perpendicular to b, and running out of the page a 2₁ screw that is the product of the two. Nothing was done to put it there; it is what the closure produced. Four of the ten groups in this arithmetic class acquire their screw exactly this way.

Composition producing operations nobody put in is the subject of its own essay, and it is the reason the machinery here always runs the closure rather than working from a list of generators. A list of generators is not a group.

What it does to a diagram

The International Tables mark an axis perpendicular to the page as a polygon with as many sides as its order — a lens for two, a triangle for three, a square for four, a hexagon for six. A screw is the same polygon left open, with tails, and the number of tails is m.

The symmetry elements of P4₁. Space group P4₁, number 76, projected down c on a primitive tetragonal cell. The symmetry elements drawn: 4 4₁ screw axes, 2 2₁ screw axes.
Fig. 6 The convention in use. Open squares with tails at the corners and the cell centre are 4₁ screws; the lenses at the edge midpoints are 2₁ screws, which arrived without being asked for — the square of a 4₁ is a two-fold operation with a rise of two quarters, which is a half, which is a 2₁.

That last observation deserves a moment. A fourfold screw is not one operation, it is a coset of them: the turn, its inverse and its square all live on the same axis, and their rises are a quarter, three quarters and a half. So a single 4₁ axis carries a 4₁, a 4₃ and a 2₁ all at once, and the Tables draw one mark for the axis rather than three marks on top of each other. The mark names the axis by its generating operation, which is the highest order with the smallest rise.

The figures on this site collapse them the same way, and the collapsing is a real decision rather than a tidy-up. Drawing all three produces a shape that is none of them.

Counting what a cell holds

The last practical consequence is the one that shows up first in a real structure determination, and it follows from the screw having no fixed point.

A rotation axis has points on it, and an atom sitting on one is fixed by the rotation — so it contributes one atom to the cell rather than a pair. A screw fixes nothing, so no atom can sit on a screw axis in the sense of being fixed by it. Every atom in a crystal whose only symmetry is a screw belongs to an orbit as long as the group.

That is a hard constraint on how much can be in a cell. In P2₁ the group has two operations and there are no special positions at all, so the number of molecules per cell is even, always. Measure a density, work out the cell volume, divide, and if the answer is an odd number of molecules the space group is wrong or the density is wrong. Crystallographers have used that arithmetic as a first sanity check since long before structures could be solved.

The general positions of P2₁. Space group P2₁, number 4, projected down c on a primitive monoclinic cell. 6 general positions, the orbit of a three-point asymmetric motif, each labelled with its height along c and marked with a comma where the operation that produced it reversed handedness.
Fig. 7 The consequence, drawn. Two cells of P2₁ with the orbit of a three-point motif in each. Every point has a partner half a cell up and half a turn round, and nothing sits anywhere that a single operation would leave alone. The group acts freely, which is the technical way of saying there is nowhere in the cell for a molecule to economise.

The plane has exactly two groups that act freely — p1 and pg — and the Wyckoff essay found them by sampling every point of a cell and asking what fixes it. In space there are more, and the useful ones for chemistry are P2₁ and P2₁2₁2₁, which between them hold the majority of published structures of chiral molecules.

Where the picture is a lie

Three things about the drawings above that a reader should not take literally.

The helix is not part of the crystal. The curve in every screw figure here is the path a point would follow if the operation were applied continuously, and the operation is not continuous. What exists are the discrete images — the dots — and the curve is an aid to seeing which dot came from which. A crystal has no spiral in it unless the atoms happen to lie on one, and in quartz they roughly do and in most screw-containing structures they do not at all.

The scale between panels is not comparable. A 6₅ screw climbs five whole cells in six turns and a 2₁ climbs one in two, so drawing them at a common scale would waste four fifths of most panels or run the tall ones off the top. Each panel is scaled to its own advance, and the figure that puts the rises on a common axis is the enumeration, where the comparison is the point.

The axis is drawn where the arithmetic put it, which is not always where the eye expects. An operation’s element is located by solving for the set it fixes, and the translates of an operation by lattice vectors have elements at fractional positions — a fourfold axis composed with a cell translation has its axis at the cell centre, not one cell along. Every mark in every plan diagram in this field is placed that way rather than by copying a mark and sliding it, which is the difference between P4/mmm having axes at its corners and centre and having them only at its corners.

What the machinery decides, and what it does not

The operation is exact and two things about it are worth stating as limits rather than as caveats.

The rise is a fraction of this cell. A rise of a quarter means a quarter of whatever the c axis happens to be, and the c axis is a property of the crystal being measured. So “4₁” is a statement about a ratio and not about a distance, and two crystals with the same space group and different cell dimensions have screws that climb by different amounts in ångströms. That is obvious once said and it is the reason the whole subject works in fractional coordinates rather than in lengths.

Nothing here says a screw is physically realised by anything. A screw axis is a symmetry of an arrangement, and the arrangement is a set of positions. Whether atoms actually spiral, whether bonds follow the helix, whether the structure is best described as helical — all of that is chemistry and this machinery cannot see it. Quartz has threefold screws and is genuinely helical; a great many structures have screw axes and nothing about them looks like a spiral, because the operation relates parts of the structure that are not bonded to each other at all.

The screws are counted next, the glides after that, and then the question of what a closure produces that nobody asked for.

A screw has infinite order

The word order was pulled apart above for one reason and it deserves pulling apart for a second, because the honest answer changes the relationship between a space group and its point group.

A rotation of order nn satisfies Rn=1R^n = 1. Apply it nn times and every point is exactly where it started. That is what makes a point group finite: it has finitely many operations and each of them, repeated, comes back.

A screw never comes back. Apply an nmn_m screw nn times and every point has been carried mm cells up the axis. Apply it nn more times and it is 2m2m cells up. There is no power of a screw that is the identity, so a screw is an element of infinite order — the same kind of element a translation is, dressed in a rotation.

So a space group is infinite in more ways than one. Its translations are infinite in number and each has infinite order, and that much is expected. What is less expected is that a non-symmorphic group contains infinitely many non-translational elements of infinite order as well, one for every screw and every glide it holds.

And the point group is a quotient rather than a subgroup. This is the sentence the whole essay has been circling. Take a space group and forget the translation attached to each operation; what is left is the point group, and forgetting is a quotient map. For a symmorphic group there is also a copy of the point group sitting inside the space group — pick the right origin and every point operation appears with translation zero. For a non-symmorphic group there is no such copy: the fourfold screw has no fourth power equal to the identity, so nothing in the group behaves like the fourfold rotation the point group contains.

That is why P4₁ and P4 have “the same point group” and are not the same anything else. The point group 4 is what forgetting leaves, in both cases. Only in P4 can it be found again by looking.

Why the plane has no screws

The plane’s classification has four non-symmorphic groups and every one of them owes its status to a glide. There is no plane screw, and the reason is worth a paragraph because it explains what a screw actually needs.

A screw is a rotation composed with a translation along its own axis. The axis is the line the rotation fixes, and the translation runs in the same direction. Both ingredients are required to point the same way.

In the plane a rotation fixes a point, not a line. The rotations of a plane pattern turn about centres, and the direction “along the axis” is out of the page — a direction the pattern does not occupy. Translating along it moves the pattern off the plane entirely, which is not a symmetry of a plane pattern.

So the only translation a plane rotation can be composed with is one in the plane, perpendicular to the axis rather than along it, and the previous section shows what that produces: a rotation of the same angle about a shifted centre. It has a fixed point, so it is a rotation, and nothing new has been made.

The mirror is the one operation with a fixed line in the plane, and a line supports a translation along itself. That is the glide, and it is the whole of the plane’s non-symmorphic supply.

Adding a dimension adds fixed lines. A rotation in space fixes an axis and a reflection fixes a plane, so both acquire directions along which they can slide — hence screws as well as glides, hence eleven screws and five glides, and hence two hundred and thirty where the same argument gave seventeen.

What this makes readable

Essays that name this one as a prerequisite.

Named alongside this one

Essays reaching for the same objects. Nobody chose these; they are what the concept index makes visible.

What links here

The 8 essays that link to this one and share the most of its objects, of 15 that link here.

The objects this essay names

Each one links to every other essay that touches it.

Fixed pointHelixIntrinsic translationLattice translationOrderRotationScrew axis