Crystallography & Symmetry
patterns derived from their groups
Concept

Wyckoff positions — where it appears

A class of positions sharing a site symmetry, listed with its multiplicity in the International Tables. The multiplicities are what turn a structure's occupied positions into a chemical formula.

Named by 13 essays across 4 fields — each of them below, with the objects they name alongside it.

Special positions in p4m. Every point of a 12×12 grid inside the cell of p4m, drawn at a size set by how many operations fix it. 80 of the 144 are general — nothing but the identity leaves them alone, so their orbit is the full 8 points. The other 64 are special, and fall into 3 kinds: 60 points fixed by 2 operations, with orbits of 4; 2 points fixed by 4 operations, with orbits of 2; 2 points fixed by 8 operations, with orbits of 1.

The points a group treats differently

Almost every point of a cell has an orbit as long as the group. The exceptions are the points some operation leaves alone, and they are where atoms sit, where a structure's formula comes from, and where a careless motif destroys the group it was meant to illustrate.

operations · Fundamental domain The general positions of P2₁/c. Space group P2₁/c, number 14, projected down c on a primitive monoclinic cell. 12 general positions, the orbit of a three-point asymmetric motif, each labelled with its height along c and marked with a comma where the operation that produced it reversed handedness.

One part in however many, and why it is never quite that

A crystal's contents are the asymmetric unit repeated by the group. The unit's volume is the cell's divided by the order of the group — except that it is always a little more, and the excess is exactly the special positions counted whole.

operations · Fundamental domain orders 5 and 7 reach a site of symmetry 1 and no more. A molecule whose only symmetry is one n-fold axis, and the highest site symmetry it may occupy in any of the 45 space groups this site builds. The site's symmetry has to be a subgroup of the molecule's, so the site's order must divide n and the site group must be cyclic. Orders 1, 2, 3, 4 and 6 reach a site of their own order. Orders 5 and 7 reach one, because no site symmetry in any space group contains an operation of order five or seven — the orders available are 1, 2, 3, 4, 6, computed by asking every operation of every group whether it moves a point. A five-fold molecule keeps its axis; the crystal simply has no use for it.

What a molecule gives up to sit in a crystal

A molecule brings its own symmetry. A crystal offers sites with symmetries of their own, and the two have to be compatible — the site's symmetry must be a subgroup of the molecule's. So a molecule may always keep more than its site offers, and a molecule with a five-fold axis may sit only where the crystal offers nothing at all.

restriction · Local symmetry p4m: which distortions the atoms of each position can make. Every Wyckoff position of p4m, with the number of independent displacement patterns of each symmetry its atoms supply. A zero is a distortion those atoms cannot make however their amplitudes are chosen — an atom pinned at a rotation centre cannot move in a way that keeps less symmetry than the centre has. The row sums, weighted by the dimensions along the top, come to twice the number of atoms in the cell, which is the check that nothing has been lost. The last column is the number of free coordinates the position has, and it equals the multiplicity of the identity representation in that row: a displacement that keeps every symmetry is exactly a move of the position within its own Wyckoff set.

Which modes a site can carry

An atom on a mirror cannot move in a way that breaks the mirror while its images move with it: the displacements of a Wyckoff orbit carry a representation, and some of its pieces have multiplicity zero. The count of those pieces is a character, and the one that breaks nothing is the position's own freedom.

operations · Fundamental domain One orbit of p4m, two of p4. The general position of p4m — 8 points in a cell, all equivalent under that group — with each point coloured by which orbit of p4 it belongs to. Losing half the operations does not move a single point; it changes which of them are related, and the one orbit becomes 2. An atom sitting on this position in the parent becomes 2 crystallographically distinct atoms in the child, which may then be different elements, or move independently, or order.

What a position becomes on the way down

Cool a crystal through a transition and it loses operations. Nothing moves — and one crystallographic site becomes two, which is how an ordering transition finds somewhere to put a second kind of atom.

operations · Fundamental domain Ten chains, two phases. The Zak phase of the lower band of a two-site chain, as the ratio of the two hoppings is swept. Every value is exactly zero or exactly π and nothing lies between them, because the chain has an inversion centre and inversion maps the zone loop to itself reversed — which forces the phase to equal its own negative modulo a full turn. The switch happens where the two hoppings are equal, which is the one place the band gap closes and the phase belongs to no band.

The phase a symmetry turns into a number

Carry a band's state once across the Brillouin zone and it returns with a phase. In a chain with an inversion centre that phase is exactly zero or exactly π and never anything else — and the two values turn out to be the two positions in the cell that an inversion centre fixes. Remove the centre and the phase moves continuously, which is what a quantisation claim has to be able to lose.

space-groups · K symmetry Seventy-two positions and the sets they fall into. Every plane group with the number of its Wyckoff positions, and the number of sets those positions fall into when the positions a normaliser exchanges are counted once: on the cell the group requires, on the most symmetric cell it may sit on, and under every change of basis carrying the group onto itself. 72 positions become 53 sets on the required cells and 51 on the best ones, and the last column never goes lower. The two groups a special cell changes are pmm and cmm.

The same site under two names

A structure report puts each atom on a Wyckoff position, and two correct reports of one crystal can name different positions. The positions that can trade places are exactly the ones the normaliser exchanges — and which those are depends on the cell as measured, not only on the group.

operations · Normalisers p2's symmetries, sorted into classes by the group itself. A pattern with the symmetry of p2 over 2 by 2 cells, with its rotation centres and mirror lines marked in the International Tables' shapes and coloured by conjugacy class in the infinite group: two marks share a colour exactly when some operation of the group carries one element onto the other. Where rotations of several orders share a centre, the mark is the highest order's and so is its colour. Glides are not drawn. Classes counted: half-turns: 1 in the quotient, 4 in the group.

Two mirrors a coset cannot tell apart

Taken modulo its lattice a wallpaper group is finite, and its conjugacy classes are easy to list. But a coset holds every mirror of one direction at once, and the group itself keeps apart mirrors the list merges: pm has two classes of mirror, p2 four classes of half-turn, p3 six classes of rotation. Deciding which is which is Dehn's conjugacy problem, and for these groups it comes down to whether one vector lies in one lattice.

operations · What symmetry is Four inversion centres, and a band's charge on each. A square crystal with four atoms in each cell, at the points a quarter of the way along both diagonals, and the four points of the cell that an inversion maps onto themselves: the corner, the midpoints of the two edges, and the centre. None of the atoms sits on one. For each of four versions of the crystal, differing only in which bonds are stronger, the ring marks where the lowest band's charge is centred — computed from the band's Berry phase and predicted from four parities. Each version puts it on a different inversion centre, and in every case on a point with no atom.

Four signs say where the charge sits

In a plane crystal whose only symmetry beyond its lattice is a centre, a band's charge must sit on one of the cell's four inversion centres — and which one is decided by four signs: whether the band is even or odd under inversion at the four wavevectors inversion leaves alone. The centre can be a point no atom occupies, and when the four signs multiply to minus one there is no centre at all, only a charge that winds round the cell.

space-groups · K symmetry Every group a symmetric motif can lift a plane group to. The seventeen plane groups arranged by lattice, with an arrow from each group to every group a motif of higher symmetry, placed at some position, turns it into, on the generic lattice of the first. Dashed arrows mark the lifts that also halve the cell, two of which return the same type on the smaller cell. p1 lifts only to p2, the rectangular groups to pmm, pmg and cmm, the square ones to p4g and p4m, and p3 to four different groups. Three groups, outlined, cannot be lifted at all without a special metric: p2, pmm and p6m.

Where a symmetric motif lifts the group

A motif with more symmetry than its site asks for can raise the group of the whole pattern — or not, and which one is decided by the site, not the motif. The criterion is one line: a symmetry of the motif survives into the pattern exactly when it normalises the group. Run over every Wyckoff position of the seventeen, it finds twenty-nine of seventy-two where a motif can lift the group, general positions only in the four groups with a direction to slide along, two sites where the same motif gives different groups depending on how it is turned, and seven lifts between groups that halve the cell.

classification · Accidental symmetry Every special position of the seventeen plane groups, with its regular subgroups. The 55 special Wyckoff positions of the seventeen plane groups, one chip each, labelled by site symmetry and points to a cell and carrying the number of subgroups that act on the position regularly. None is zero. 26 positions have one point to a cell and are reached by the lattice alone; 12 can be reached only by subgroups containing rotations; four, the positions of three points to a cell in p3m1, p31m, p6 and p6m, are reached by exactly one subgroup each.

No Petersen graph in the plane

A finite graph can look the same from every vertex and still be the picture of no group; the Petersen graph is the smallest that does. A periodic net in the plane cannot. Whether one is a Cayley graph depends only on where its vertices sit, and they sit on one of the fifty-five special positions of the seventeen plane groups or on a general one. Every one of the fifty-five has a subgroup that carries any of its points to any other in exactly one way, and four of them have exactly one.

operations · Presentations 1,694 positions, 1,182 sets on the general cell, and 1,128 on the best. Every affine type of space group by crystal system: its Wyckoff positions, the sets those fall into under the normaliser on the cell the group requires, on the best cell it may sit on, and under the whole affine normaliser. The total is 1694 positions, 1731 with enantiomorphs counted twice, 1182 sets on the general cell and 1128 on the best, which equals the affine 1128 in every system. The two columns differ only in the orthorhombic system and in one monoclinic type.

One cell reaches every Wyckoff set

In the plane, every identification the affine normaliser makes between two positions is made by an isometry of some cell, and the essay that found this warned against carrying it into space, where changes of basis can mix axes without limit. It carries. The 1,731 positions of the 230 groups were found from stabilisers and the sets from normalisers, and on one cell for each type the two partitions agree. Past the monoclinic system that is a one-line average. Below it, the infinite normaliser turns out to have nothing left to join.

operations · Normalisers Two positions in three can be lifted, and more than one in three can lose their cell. All 1694 Wyckoff positions of the 219 affine types by crystal system. On 1132 a motif with more symmetry than its site can raise the group of the crystal, and on 606 of those, across 126 types, some such motif makes the true cell smaller than the group's.

In space a motif can lift two positions in three

A molecule with more symmetry than its site can raise the group of the whole crystal, or not, and which one is decided by the site. In the plane twenty-nine positions of seventy-two allow it. In space it is 1,132 of 1,694, and 606 of them allow a lift that shrinks the cell, the case a structure solution meets as a warning. General positions can be lifted only in polar groups, as predicted, but eleven polar groups refuse: a mirror turns their screws over.

classification · Accidental symmetry

Named alongside it

The objects these essays reach for when they reach for this one.

Site symmetryStabiliserNormaliserMultiplicityOrbitSpecial positionAccidental symmetryBand structureBrillouin zoneConjugationEquivalent originHolohedry

All concepts